NTDB: Thermodynamic Database for Nucleic Acids, Version 2.0
- 1 January 2003
- journal article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 31 (1), 483-485
- https://doi.org/10.1093/nar/gkg114
Abstract
The second release of Thermodynamic Database for Nucleic Acids, NTDB 2.0, includes more than 4600 entries (250% increase over release 1.0). It contains sequence types and details of several thermodynamic parameters (enthalpy, DeltaH; entropy, DeltaS; Gibbs free energy, DeltaG; melting temperature, T(m)), experimental models and methods for extracting thermodynamic parameters, buffer conditions as well as all relevant literature information. In addition, the database statistics and references related to NTDB are included. Information on normal and modified nucleobases and nucleosides are collected in a new section 'Nucleoside' whereby data collected thus far will be release in NTDB 2.0. The NTDB is freely available at http://ntdb.chem.cuhk.edu.hk.Keywords
This publication has 6 references indexed in Scilit:
- The Protein Data Bank: unifying the archiveNucleic Acids Research, 2002
- Database resources of the National Center for Biotechnology Information: 2002 updateNucleic Acids Research, 2002
- NTDB: Thermodynamic Database for Nucleic AcidsNucleic Acids Research, 2001
- The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000Nucleic Acids Research, 2000
- The ups and downs of nucleic acid duplex stability: structure-stability studies on chemically-modified DNA:RNA duplexesNucleic Acids Research, 1997
- The nucleic acid database. A comprehensive relational database of three-dimensional structures of nucleic acidsBiophysical Journal, 1992