The Relationship between the Flexibility of Proteins and their Conformational States on Forming Protein–Protein Complexes with an Application to Protein–Protein Docking
- 1 April 2005
- journal article
- Published by Elsevier BV in Journal of Molecular Biology
- Vol. 347 (5), 1077-1101
- https://doi.org/10.1016/j.jmb.2005.01.058
Abstract
No abstract availableKeywords
This publication has 70 references indexed in Scilit:
- FlexProt: Alignment of Flexible Protein Structures Without a Predefinition of Hinge RegionsJournal of Computational Biology, 2004
- ICM‐DISCO docking by global energy optimization with fully flexible side‐chainsProteins-Structure Function and Bioinformatics, 2003
- Effect of local shape modifications of molecular surfaces on rigid-body protein–protein dockingProtein Engineering, Design and Selection, 2003
- Principles of docking: An overview of search algorithms and a guide to scoring functionsProteins-Structure Function and Bioinformatics, 2002
- Prediction of protein–protein interactions by docking methodsCurrent Opinion in Structural Biology, 2002
- Protein–protein association kinetics and protein dockingCurrent Opinion in Structural Biology, 2002
- Protein docking along smooth association pathwaysProceedings of the National Academy of Sciences, 2001
- BiGGER: A new (soft) docking algorithm for predicting protein interactionsProteins-Structure Function and Bioinformatics, 2000
- Flexible docking allowing induced fit in proteins: Insights from an open to closed conformational isomersProteins-Structure Function and Bioinformatics, 1998
- Rapid refinement of protein interfaces incorporating solvation: application to the docking problemJournal of Molecular Biology, 1998