Configurations of Nickel–Cyclam Antiviral Complexes and Protein Recognition
Open Access
- 11 December 2006
- journal article
- research article
- Published by Wiley in Chemistry – A European Journal
- Vol. 13 (1), 40-50
- https://doi.org/10.1002/chem.200601334
Abstract
Nickel(II)–xylylbicyclam is a potent anti‐HIV agent and binds strongly to the CXCR4 co‐receptor. We have investigated configurational equilibria of NiII–cyclam derivatives, since these are important for receptor recognition. Crystallographic studies show that both trans and cis configurations are readily formed: [Ni(cyclam)(OAc)2]⋅H2O adopts the trans‐III configuration with axial monodentate acetates, as does [Ni(benzylcyclam)(NO3)2] with axial nitrate ligands, whereas [Ni(benzylcyclam)(OAc)](OAc)⋅2 H2O has an unusual folded cis‐V configuration with NiII coordination to bidentate acetate. UV/Vis and NMR studies show that the octahedral trans‐III configuration slowly converts to square‐planar trans‐I in aqueous solution. For NiII–xylylbicyclam, a mixture of cis‐V and trans‐I configurations was detected in solution. X‐ray diffraction studies showed that crystals of lysozyme soaked in NiII–cyclam or NiII2–xylylbicyclam contain two major binding sites, one involving NiII coordination to Asp101 and hydrophobic interactions between the cyclam ring and Trp62 and Trp63, and the second hydrophobic interactions with Trp123. For NiII–cyclam bound to Asp101, the cis‐V configuration predominates.This publication has 30 references indexed in Scilit:
- Structural details at active site of hen egg white lysozyme with di‐ and trivalent metal ionsPeptide Science, 2005
- Coot: model-building tools for molecular graphicsActa crystallographica. Section D, Structural biology, 2004
- Selective Recognition of Configurational Substates of Zinc Cyclam by Carboxylates: Implications for the Design and Mechanism of Action of Anti-HIV AgentsChemistry – A European Journal, 2003
- Macrocyclic ligand design. Interaction of a series of successively N-benzylated derivatives of 1,4,8,11-tetraazacyclotetradecane (cyclam) with copper(ii) and nickel(ii)Dalton Transactions, 2003
- The Protein Data BankNucleic Acids Research, 2000
- Oxidatively Induced Isomerization of Square-Planar [Ni(1,4,8,11-tetraazacyclotetradecane)](ClO4)2Inorganic Chemistry, 1997
- Refinement of Macromolecular Structures by the Maximum-Likelihood MethodActa crystallographica. Section D, Structural biology, 1997
- Two-Dimensional 1H NMR Studies on Octahedral Nickel(II) ComplexesInorganic Chemistry, 1996
- The CCP4 suite: programs for protein crystallographyActa crystallographica. Section D, Structural biology, 1994
- Electrochemical and structural studies of nickel(II) complexes of N-alkylated cyclam ligands: x-ray structures of trans-[Ni(C14H32N4)(OH2)2]Cl2.2H2O and [Ni(C14H32N4)](O3SCF3)2Inorganic Chemistry, 1986