CASP9 results compared to those of previous casp experiments
- 1 January 2011
- journal article
- research article
- Published by Wiley in Proteins-Structure Function and Bioinformatics
- Vol. 79 (S10), 196-207
- https://doi.org/10.1002/prot.23182
Abstract
The quality of structure models submitted to CASP9 is analyzed in the context of previous CASPs. Comparison methods are similar to those used in previous articles in this series, with the addition of new methods looking at model quality in regions not covered by a single best structural template, alignment accuracy, and progress for template‐free models. Progress in this CASP was again modest and statistically hard to validate. Nevertheless, there are several positive trends. There is an indication of improvement in overall model quality for the midrange of template‐based modeling difficulty, methods for identifying the best model from a set generated have improved, and there are strong indications of progress in the quality of template‐free models of short proteins. In addition, the new examination of a model quality in regions of model not covered by the best available template reveals better performance than had previously been apparent. © Proteins 2011;Keywords
This publication has 13 references indexed in Scilit:
- CASP9 assessment of free modeling target predictionsProteins-Structure Function and Bioinformatics, 2011
- Assessment of template based protein structure predictions in CASP9Proteins-Structure Function and Bioinformatics, 2011
- CASP: A Driving Force in Protein Structure ModelingPublished by Wiley ,2010
- Target domain definition and classification in CASP8Proteins-Structure Function and Bioinformatics, 2009
- CASP8 results in context of previous experimentsProteins-Structure Function and Bioinformatics, 2009
- Assessment of CASP8 structure predictions for template free targetsProteins-Structure Function and Bioinformatics, 2009
- Progress from CASP6 to CASP7Proteins-Structure Function and Bioinformatics, 2007
- Progress over the first decade of CASP experimentsProteins-Structure Function and Bioinformatics, 2005
- Assessment of progress over the CASP experimentsProteins-Structure Function and Bioinformatics, 2003
- Comparison of performance in successive CASP experimentsProteins-Structure Function and Bioinformatics, 2001