Comparative Genomic Analyses of Attenuated Strains of Mycoplasma gallisepticum
- 1 April 2010
- journal article
- research article
- Published by American Society for Microbiology in Infection and Immunity
- Vol. 78 (4), 1760-1771
- https://doi.org/10.1128/iai.01172-09
Abstract
Mycoplasma gallisepticum is a significant respiratory and reproductive pathogen of domestic poultry. While the complete genomic sequence of the virulent, low-passage M. gallisepticum strain R (R low ) has been reported, genomic determinants responsible for differences in virulence and host range remain to be completely identified. Here, we utilize genome sequencing and microarray-based comparative genomic data to identify these genomic determinants of virulence and to elucidate genomic variability among strains of M. gallisepticum . Analysis of the high-passage, attenuated derivative of R low , R high , indicated that relatively few total genomic changes (64 loci) occurred, yet they are potentially responsible for the observed attenuation of this strain. In addition to previously characterized mutations in cytadherence-related proteins, changes included those in coding sequences of genes involved in sugar metabolism. Analyses of the genome of the M. gallisepticum vaccine strain F revealed numerous differences relative to strain R, including a highly divergent complement of vlhA surface lipoprotein genes, and at least 16 genes absent or significantly fragmented relative to strain R. Notably, an R low isogenic mutant in one of these genes (MGA_1107) caused significantly fewer severe tracheal lesions in the natural host compared to virulent M. gallisepticum R low . Comparative genomic hybridizations indicated few genetic loci commonly affected in F and vaccine strains ts-11 and 6/85, which would correlate with proteins affecting strain R virulence. Together, these data provide novel insights into inter- and intrastrain M. gallisepticum genomic variability and the genetic basis of M. gallisepticum virulence.Keywords
This publication has 66 references indexed in Scilit:
- A Metabolic Operon in Extraintestinal PathogenicEscherichia coliPromotes Fitness under Stressful Conditions and Invasion of Eukaryotic CellsJournal of Bacteriology, 2009
- HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-ProtNucleic Acids Research, 2008
- Cytotoxicity ofMycoplasma mycoidessubsp.mycoidesSmall Colony Type to Bovine Epithelial CellsInfection and Immunity, 2008
- The Chymotrypsin-Like Protease Complex ofTreponema denticolaATCC 35405 Mediates Fibrinogen Adherence and DegradationInfection and Immunity, 2007
- RNAmmer: consistent and rapid annotation of ribosomal RNA genesNucleic Acids Research, 2007
- Improved microbial gene identification with GLIMMERNucleic Acids Research, 1999
- Comparison of DNA Sequences with Protein SequencesGenomics, 1997
- tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic SequenceNucleic Acids Research, 1997
- A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysisGene, 1995
- Basic Local Alignment Search ToolJournal of Molecular Biology, 1990