The gene‐protein database of Escherichia coli: Edition 5
- 1 January 1992
- journal article
- research article
- Published by Wiley in Electrophoresis
- Vol. 13 (1), 1014-1054
- https://doi.org/10.1002/elps.11501301203
Abstract
The gene-protein database of Escherichia coli is both an index relating a gene to its protein product on two-dimensional gels, and a catalog of information about the function, regulation, and genetics of individual proteins obtained from two-dimensional gel analysis or collated from the literature. Edition 5 has 102 new entries–a 15% increase in the number of annotated two-dimensional gel spots. The large increase in this edition was accomplished in part by the use of a new method for expression analysis of ordered segments of the E. coli genome, which has resulted in linking 50 gel spots to their genes (or open reading frames) and another 45 to specific regions of the chromosome awaiting the availability of DNA sequence information. Communication of information from the scientific community resulted in additional identifications and regulatory information. To increase accessibility of the database it has been placed in the repository at the National Center for Biotechnology Information (NCBI) at the National Library of Medicine under the name ECO2DBASE. It will be updated twice yearly. This edition of the gene-protein database is estimated to contain entries for one-sixth of the protein-encoding genes of E. coli.Keywords
This publication has 43 references indexed in Scilit:
- Analysis of the Escherichia coli Genome: DNA Sequence of the Region from 84.5 to 86.5 MinutesScience, 1992
- The gene‐protein database of Escherichia coli: Edition 4Electrophoresis, 1991
- Gene‐Protein database of Escherichia coli K ‐ 12: Edition 3Electrophoresis, 1990
- The physical map of the whole E. coli chromosome: Application of a new strategy for rapid analysis and sorting of a large genomic libraryCell, 1987
- Positive control of a regulon for defenses against oxidative stress and some heat-shock proteins in Salmonella typhimuriumCell, 1985
- Positive regulatory gene for temperature-controlled proteins in Escherichia coliBiochemical and Biophysical Research Communications, 1981
- Multiple methylation of methyl-accepting chemotaxis proteins during adaptation of E. coli to chemical stimuliCell, 1980
- Patterns of protein synthesis in E. coli: a catalog of the amount of 140 individual proteins at different growth ratesCell, 1978
- High resolution two-dimensional electrophoresis of basic as well as acidic proteinsCell, 1977
- The Operon: On Its Third AnniversaryScience, 1964