Variability in GWAS analysis: the impact of genotype calling algorithm inconsistencies
Open Access
- 30 July 2010
- journal article
- research article
- Published by Springer Science and Business Media LLC in The Pharmacogenomics Journal
- Vol. 10 (4), 324-335
- https://doi.org/10.1038/tpj.2010.46
Abstract
No abstract availableKeywords
This publication has 15 references indexed in Scilit:
- Quantifying uncertainty in genotype callsBioinformatics, 2009
- Replication in Genome-Wide Association StudiesStatistical Science, 2009
- Kinesin Family Member 6 Variant Trp719Arg Does Not Associate With Angiographically Defined Coronary Artery Disease in the Ottawa Heart Genomics StudyJournal of the American College of Cardiology, 2009
- Progress and challenges in genome-wide association studies in humansNature, 2008
- Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samplesBMC Bioinformatics, 2008
- Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarraysGenome Biology, 2008
- A second generation human haplotype map of over 3.1 million SNPsNature, 2007
- Population structure, differential bias and genomic control in a large-scale, case-control association studyNature Genetics, 2005
- Ranks of Genuine Associations in Whole-Genome ScansGenetics, 2005
- More powerful procedures for multiple significance testingStatistics in Medicine, 1990