Hybrid parallelization of a multi-tree path search algorithm: Application to highly-flexible biomolecules
- 1 September 2018
- journal article
- research article
- Published by Elsevier BV in Parallel Computing
- Vol. 77, 84-100
- https://doi.org/10.1016/j.parco.2018.06.005
Abstract
No abstract availableKeywords
Funding Information
- European Research Council (648030)
- ANR (ANR-12-MONU-0015)
This publication has 33 references indexed in Scilit:
- Motion planning algorithms for molecular simulations: A surveyComputer Science Review, 2012
- GPU-based parallel collision detection for fast motion planningThe International Journal of Robotics Research, 2011
- Intrinsically disordered proteins: regulation and diseaseCurrent Opinion in Structural Biology, 2011
- Intrinsically Disordered Proteins in Human Diseases: Introducing the D2ConceptAnnual Review of Biophysics, 2008
- Folding free‐energy landscape of a 10‐residue mini‐protein, chignolinFEBS Letters, 2006
- Scalable molecular dynamics with NAMDJournal of Computational Chemistry, 2005
- Replica exchange molecular dynamics simulations of reversible foldingThe Journal of Chemical Physics, 2003
- Molecular dynamics simulations of biomoleculesNature Structural & Molecular Biology, 2002
- Replica-exchange molecular dynamics method for protein foldingChemical Physics Letters, 1999
- A parallel molecular dynamics strategyJournal of Computational Chemistry, 1985