Characteristics and complete genome sequence of the virulent Vibrio alginolyticus phage VAP7, isolated in Hainan, China
- 1 April 2020
- journal article
- research article
- Published by Springer Science and Business Media LLC in Archiv für die gesamte Virusforschung
- Vol. 165 (4), 947-953
- https://doi.org/10.1007/s00705-020-04535-4
Abstract
A novel Vibrio alginolyticus phage, VAP7, was isolated from seawater collected from Sanya, Hainan province, China. Whole-genome sequencing analysis revealed that phage VAP7 has a linear, double-stranded DNA genome of 144,685 bp with an average G+C content of 41.9% and a high degree of sequence similarity to Vibrio phage VP-1. Annotation results identified 193 open reading frames and one transfer RNA-encoding gene in the phage genome. The morphology and the results of phylogenetic analysis suggest that VAP7 should be classified as a new member of the family Ackermannviridae. Moreover, phage VAP7 grew over a wide pH (5.0-10.0) and temperature (4-40 degrees C) range. Host-range experiments revealed that VAP7 could infect 31 Vibrio alginolyticus strains. Thus, VAP7 infecting Vibrio alginolyticus strains represents a potential new candidate for use in phage therapy.Funding Information
- the Capital Characteristic Clinic Project of Beijing (Z161100000516181)
- the national key Research and Development Program of China (2016YFC1202705, AWS16J020, AWS15J006)
- the National Science and Technology Major Project (2018ZX10201001)
This publication has 38 references indexed in Scilit:
- Large Terminase Conformational Change Induced by Connector Binding in Bacteriophage T7Online Journal of Public Health Informatics, 2013
- The host-range, genomics and proteomics of Escherichia coli O157:H7 bacteriophage rV5Virology Journal, 2013
- Characterization and Comparative Genomic Analysis of a Novel Bacteriophage, SFP10, Simultaneously Inhibiting both Salmonella enterica and Escherichia coli O157:H7Applied and Environmental Microbiology, 2012
- Bacteriophages and their genomesCurrent Opinion in Virology, 2011
- Easyfig: a genome comparison visualizerBioinformatics, 2011
- The RAST Server: Rapid Annotations using Subsystems TechnologyBMC Genomics, 2008
- Homologous recombination in DNA repair and DNA damage toleranceCell Research, 2008
- Isolation of Vibrio harveyi bacteriophage with a potential for biocontrol of luminous vibriosis in hatchery environmentsAquaculture, 2006
- The bacteriophage T4 DNA packaging apparatus targets the unexpanded proheadJournal of Molecular Biology, 1998
- tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic SequenceNucleic Acids Research, 1997