Tet2 Inactivation Enhances the Antitumor Activity of Tumor-Infiltrating Lymphocytes

Abstract
Inactivation of tumor-infiltrating lymphocytes (TIL) is one of the mechanisms mitigating anti-tumor immunity during tumor onset and progression. Epigenetic abnormalities are regarded as a major culprit contributing to the dysfunction of TILs within tumor microenvironments. In this study, we used a murine model of melanoma to discover that Tet2 inactivation significantly enhances the anti-tumor activity of TILs with an efficacy comparable to immune checkpoint inhibition imposed by anti-PD-L1 treatment. Single-cell RNA-seq analysis suggested that Tet2-deficient TILs exhibit effector-like features. Transcriptomic and ATAC-seq analysis showed that Tet2 ablation reshapes chromatin accessibility and favors binding of transcription factors geared toward CD8+ T cell activation. Furthermore, the ETS family of transcription factors contributed to augmented CD8+ T cell function following Tet2 depletion. Overall, our study establishes that Tet2 constitutes one of the epigenetic barriers that account for dysfunction of TILs, and that Tet2 inactivation could promote anti-tumor immunity to suppress tumor growth.
Funding Information
  • CPRIT (CPRIT RP120348, RP170002)
  • Cancer Prevention and Research Institute of Texas (RP180131)
  • Cancer Prevention and Research Institute of Texas (RP190581)
  • NIH (R01HL134780, R21GM138824, R01HL146852)
  • NIH (R01GM112003, R21GM132778, R01CA232017)
  • Welch Foundation (BE-1913-20190330)
  • American Cancer Society (RSG-18-043-01-LIB)
  • American Cancer Society (RSG-16-215-01-TBE)