Protocol for comprehensive RNA sequencing analysis of murine long non-coding RNAs during aging
Open Access
- 20 March 2021
- journal article
- research article
- Published by Elsevier BV in STAR Protocols
- Vol. 2 (2), 100397
- https://doi.org/10.1016/j.xpro.2021.100397
Abstract
No abstract availableKeywords
Funding Information
- National Medical Research Council (NMRC/OFIRG/0062/2017)
- Ministry of Education - Singapore (MOE2016-T2-2-029, MOE2017-T2-2-015, MOE2018-T2-1-046, MOE2018-T2-2-006, MOE2019-T2-1-025)
This publication has 14 references indexed in Scilit:
- De Novo Reconstruction of Adipose Tissue Transcriptomes Reveals Long Non-coding RNA Regulators of Brown Adipocyte DevelopmentCell Metabolism, 2015
- The evolution of lncRNA repertoires and expression patterns in tetrapodsNature, 2014
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic featuresBioinformatics, 2013
- STAR: ultrafast universal RNA-seq alignerBioinformatics, 2012
- A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysisBriefings in Bioinformatics, 2012
- clusterProfiler: an R Package for Comparing Biological Themes Among Gene ClustersOMICS: A Journal of Integrative Biology, 2012
- Differential expression analysis for sequence count dataGenome Biology, 2010
- A scaling normalization method for differential expression analysis of RNA-seq dataGenome Biology, 2010
- The Sequence Alignment/Map format and SAMtoolsBioinformatics, 2009
- Fast and accurate short read alignment with Burrows–Wheeler transformBioinformatics, 2009