Complexity of Molecular Nets: Topological Approach and Descriptive Statistics
Open Access
- 24 January 2022
- Vol. 14 (2), 220
- https://doi.org/10.3390/sym14020220
Abstract
The molecular net complexity (HmolNet) is an extension of the combinatorial complexity (Hmol) of a crystal structure introduced by Krivovichev. It was calculated for a set of 4152 molecular crystal structures with the composition of CxHyOz characterized by the structural class P21/c, Z = 4 (1). The molecular nets were derived from the molecular Voronoi–Dirichlet Polyhedra (VDPmol). The values of the molecular coordination number (CNmol) and critical coordination number (CNcrit) are discussed in relation with the complexity of the crystal structures. A statistical distribution of the set of molecular crystals based on the values of CNmol, CNcrit, and the complexity parameters is obtained. More than a half of the considered structures has CNmol = 14 and CNmol′ = 9 with the Wyckoff set of edges e5dcba. The average multiplicity of intermolecular contacts statistically significantly decreases from 1.58 to 1.51 upon excluding all contacts except those bearing the molecular net. The normalized value of HmolNet is of the logistic distribution type and is distributed near 0.85HmolNet with a small standard deviation. The contribution of Hmol into HmolNet ranges from 35 to 95% (mean 79%, SD 6%), and the subset of bearing intermolecular contacts accounts for 41 to 100% (mean 62%, SD 11%) of the complexity of the full set of intermolecular contacts.Keywords
Funding Information
- Russian Science Foundation (20-77-10065)
This publication has 50 references indexed in Scilit:
- Polymorphism and polymerisation of acrylic and methacrylic acid at high pressureCrystEngComm, 2011
- Euclidian embeddings of periodic nets: definition of a topologically induced complete set of geometric descriptors for crystal structuresActa Crystallographica Section A Foundations of Crystallography, 2010
- Vertex-, face-, point-, Schläfli-, and Delaney-symbols in nets, polyhedra and tilings: recommended terminologyCrystEngComm, 2009
- The Reticular Chemistry Structure Resource (RCSR) Database of, and Symbols for, Crystal NetsAccounts of Chemical Research, 2008
- Axiomatic Characterizations of Information MeasuresEntropy, 2008
- Crystal packing in some flexible carboxylic acids and esters attached to a naphthalene ringCrystEngComm, 2008
- Crystallographic nets and their quotient graphsCrystal Research and Technology, 2004
- Spiropentane as a tensile springJournal of the American Chemical Society, 1989
- Nomenclature and generation of three-periodic nets: the vector methodActa Crystallographica Section A Foundations of Crystallography, 1984
- α-Methyl-trans-cinnamic acid (m.p. 355 K)Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials, 1982