The genome sequence of the Oak-tree Pug, Eupithecia dodoneata (Guenée, 1858)
Open Access
- 23 March 2023
- journal article
- data note
- Published by F1000 Research Ltd in Wellcome Open Research
Abstract
We present a genome assembly from an individual male Eupithecia dodoneata (the Oak-tree Pug; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence is 353.7 megabases in span. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules, including the assembled Z sex chromosome. The mitochondrial genome has also been assembled and is 15.3 kilobases in length.Funding Information
- Wellcome Trust (206194, 218328)
This publication has 18 references indexed in Scilit:
- Haplotype-resolved de novo assembly using phased assembly graphs with hifiasmNature Methods, 2021
- Significantly improving the quality of genome assemblies through curationGigaScience, 2021
- Merqury: reference-free quality, completeness, and phasing assessment for genome assembliesGenome Biology, 2020
- MitoFinder: Efficient automated large‐scale extraction of mitogenomic data in target enrichment phylogenomicsMolecular Ecology Resources, 2020
- BlobToolKit – Interactive Quality Assessment of Genome AssembliesG3 Genes|Genomes|Genetics, 2020
- Identifying and removing haplotypic duplication in primary genome assembliesBioinformatics, 2020
- HiGlass: web-based visual exploration and analysis of genome interaction mapsGenome Biology, 2018
- Caterpillar (Lepidoptera) communities on oak (Quercus pubescens) in Ankara Province (Turkey)Turkish Journal of Entomology, 2016
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologsBioinformatics, 2015
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin LoopingCell, 2014