Toward Understanding Optical Properties of Amyloids: A Reaction Path and Nonadiabatic Dynamics Study

Abstract

Amyloids have unique structural, chemical and optical properties. Although much theoretical effort has been directed toward understanding amyloid nucleation, the understanding of their optical properties has remained rather limited. In particular, the photophysical mechanisms leading to near UV excitation and characteristic blue-green luminescence in amyloid systems devoid of aromatic amino acids have not been resolved. We use ab initio static calculations and nonadiabatic dynamics simulations to study the excited electronic states of model amyloid-like peptides. We show that their photophysics is essentially governed by the multitude of nπ^* states with excitation localized on the amide groups. The strong stabilization of the nπ^* states with respect to the amide group deplanarization and the concomitant increase of the oscillator strength makes excitation in the near UV possible. With respect to emission, our dynamics simulations revealed that the amyloid cross β arrangement effectively hinders the nonradiative relaxation channels operative in functional proteins. Finally, we show that after relaxation of the photoexcited peptides toward the minimum of the different nπ^* states, fluorescence takes place in the visible (green) part of the electromagnetic spectrum.